Anterior foregut microbiota of the glassy-winged sharpshooter explored using deep 16S rRNA gene sequencing from individual insects.
Identifieur interne : 000537 ( Main/Exploration ); précédent : 000536; suivant : 000538Anterior foregut microbiota of the glassy-winged sharpshooter explored using deep 16S rRNA gene sequencing from individual insects.
Auteurs : Elizabeth E. Rogers [États-Unis] ; Elaine A. Backus [États-Unis]Source :
- PloS one [ 1932-6203 ] ; 2014.
Descripteurs français
- KwdFr :
- ARN ribosomique 16S (composition chimique), ARN ribosomique 16S (génétique), Animaux (MeSH), Données de séquences moléculaires (MeSH), Espèce introduite (MeSH), Hemiptera (microbiologie), Interactions hôte-pathogène (MeSH), Maladies des plantes (microbiologie), Microbiote (génétique), Phylogenèse (MeSH), Protéines bactériennes (génétique), Protéines du cytosquelette (génétique), Système digestif (microbiologie), Séquence nucléotidique (MeSH), Séquençage nucléotidique à haut débit (MeSH), Vecteurs insectes (microbiologie), Vitis (microbiologie), Wolbachia (classification), Wolbachia (génétique), Xylella (classification), Xylella (génétique).
- MESH :
- composition chimique : ARN ribosomique 16S, Wolbachia, Xylella.
- génétique : ARN ribosomique 16S, Microbiote, Protéines bactériennes, Protéines du cytosquelette, Wolbachia, Xylella.
- microbiologie : Hemiptera, Maladies des plantes, Système digestif, Vecteurs insectes, Vitis.
- Animaux, Données de séquences moléculaires, Espèce introduite, Interactions hôte-pathogène, Phylogenèse, Séquence nucléotidique, Séquençage nucléotidique à haut débit.
English descriptors
- KwdEn :
- Animals (MeSH), Bacterial Proteins (genetics), Base Sequence (MeSH), Cytoskeletal Proteins (genetics), Digestive System (microbiology), Hemiptera (microbiology), High-Throughput Nucleotide Sequencing (MeSH), Host-Pathogen Interactions (MeSH), Insect Vectors (microbiology), Introduced Species (MeSH), Microbiota (genetics), Molecular Sequence Data (MeSH), Phylogeny (MeSH), Plant Diseases (microbiology), RNA, Ribosomal, 16S (chemistry), RNA, Ribosomal, 16S (genetics), Vitis (microbiology), Wolbachia (classification), Wolbachia (genetics), Xylella (classification), Xylella (genetics).
- MESH :
- chemical , chemistry : RNA, Ribosomal, 16S.
- chemical , genetics : Bacterial Proteins, Cytoskeletal Proteins, RNA, Ribosomal, 16S.
- classification : Wolbachia, Xylella.
- genetics : Microbiota, Wolbachia, Xylella.
- microbiology : Digestive System, Hemiptera, Insect Vectors, Plant Diseases, Vitis.
- Animals, Base Sequence, High-Throughput Nucleotide Sequencing, Host-Pathogen Interactions, Introduced Species, Molecular Sequence Data, Phylogeny.
Abstract
The glassy-winged sharpshooter (GWSS) is an invasive insect species that transmits Xylella fastidiosa, the bacterium causing Pierce's disease of grapevine and other leaf scorch diseases. X. fastidiosa has been shown to colonize the anterior foregut (cibarium and precibarium) of sharpshooters, where it may interact with other naturally-occurring bacterial species. To evaluate such interactions, a comprehensive list of bacterial species associated with the sharpshooter cibarium and precibarium is needed. Here, a survey of microbiota associated with the GWSS anterior foregut was conducted. Ninety-six individual GWSS, 24 from each of 4 locations (Bakersfield, CA; Ojai, CA; Quincy, FL; and a laboratory colony), were characterized for bacteria in dissected sharpshooter cibaria and precibaria by amplification and sequencing of a portion of the 16S rRNA gene using Illumina MiSeq technology. An average of approximately 150,000 sequence reads were obtained per insect. The most common genus detected was Wolbachia; sequencing of the Wolbachia ftsZ gene placed this strain in supergroup B, one of two Wolbachia supergroups most commonly associated with arthropods. X. fastidiosa was detected in all 96 individuals examined. By multilocus sequence typing, both X. fastidiosa subspecies fastidiosa and subspecies sandyi were present in GWSS from California and the colony; only subspecies fastidiosa was detected in GWSS from Florida. In addition to Wolbachia and X. fastidiosa, 23 other bacterial genera were detected at or above an average incidence of 0.1%; these included plant-associated microbes (Methylobacterium, Sphingomonas, Agrobacterium, and Ralstonia) and soil- or water-associated microbes (Anoxybacillus, Novosphingobium, Caulobacter, and Luteimonas). Sequences belonging to species of the family Enterobacteriaceae also were detected but it was not possible to assign these to individual genera. Many of these species likely interact with X. fastidiosa in the cibarium and precibarium.
DOI: 10.1371/journal.pone.0106215
PubMed: 25184624
PubMed Central: PMC4153580
Affiliations:
Links toward previous steps (curation, corpus...)
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X. fastidiosa has been shown to colonize the anterior foregut (cibarium and precibarium) of sharpshooters, where it may interact with other naturally-occurring bacterial species. To evaluate such interactions, a comprehensive list of bacterial species associated with the sharpshooter cibarium and precibarium is needed. Here, a survey of microbiota associated with the GWSS anterior foregut was conducted. Ninety-six individual GWSS, 24 from each of 4 locations (Bakersfield, CA; Ojai, CA; Quincy, FL; and a laboratory colony), were characterized for bacteria in dissected sharpshooter cibaria and precibaria by amplification and sequencing of a portion of the 16S rRNA gene using Illumina MiSeq technology. An average of approximately 150,000 sequence reads were obtained per insect. The most common genus detected was Wolbachia; sequencing of the Wolbachia ftsZ gene placed this strain in supergroup B, one of two Wolbachia supergroups most commonly associated with arthropods. X. fastidiosa was detected in all 96 individuals examined. By multilocus sequence typing, both X. fastidiosa subspecies fastidiosa and subspecies sandyi were present in GWSS from California and the colony; only subspecies fastidiosa was detected in GWSS from Florida. In addition to Wolbachia and X. fastidiosa, 23 other bacterial genera were detected at or above an average incidence of 0.1%; these included plant-associated microbes (Methylobacterium, Sphingomonas, Agrobacterium, and Ralstonia) and soil- or water-associated microbes (Anoxybacillus, Novosphingobium, Caulobacter, and Luteimonas). Sequences belonging to species of the family Enterobacteriaceae also were detected but it was not possible to assign these to individual genera. Many of these species likely interact with X. fastidiosa in the cibarium and precibarium. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">25184624</PMID><DateCompleted><Year>2015</Year><Month>05</Month><Day>26</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>9</Issue><PubDate><Year>2014</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Anterior foregut microbiota of the glassy-winged sharpshooter explored using deep 16S rRNA gene sequencing from individual insects.</ArticleTitle><Pagination><MedlinePgn>e106215</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0106215</ELocationID><Abstract><AbstractText>The glassy-winged sharpshooter (GWSS) is an invasive insect species that transmits Xylella fastidiosa, the bacterium causing Pierce's disease of grapevine and other leaf scorch diseases. X. fastidiosa has been shown to colonize the anterior foregut (cibarium and precibarium) of sharpshooters, where it may interact with other naturally-occurring bacterial species. To evaluate such interactions, a comprehensive list of bacterial species associated with the sharpshooter cibarium and precibarium is needed. Here, a survey of microbiota associated with the GWSS anterior foregut was conducted. Ninety-six individual GWSS, 24 from each of 4 locations (Bakersfield, CA; Ojai, CA; Quincy, FL; and a laboratory colony), were characterized for bacteria in dissected sharpshooter cibaria and precibaria by amplification and sequencing of a portion of the 16S rRNA gene using Illumina MiSeq technology. An average of approximately 150,000 sequence reads were obtained per insect. The most common genus detected was Wolbachia; sequencing of the Wolbachia ftsZ gene placed this strain in supergroup B, one of two Wolbachia supergroups most commonly associated with arthropods. X. fastidiosa was detected in all 96 individuals examined. By multilocus sequence typing, both X. fastidiosa subspecies fastidiosa and subspecies sandyi were present in GWSS from California and the colony; only subspecies fastidiosa was detected in GWSS from Florida. In addition to Wolbachia and X. fastidiosa, 23 other bacterial genera were detected at or above an average incidence of 0.1%; these included plant-associated microbes (Methylobacterium, Sphingomonas, Agrobacterium, and Ralstonia) and soil- or water-associated microbes (Anoxybacillus, Novosphingobium, Caulobacter, and Luteimonas). Sequences belonging to species of the family Enterobacteriaceae also were detected but it was not possible to assign these to individual genera. Many of these species likely interact with X. fastidiosa in the cibarium and precibarium. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Rogers</LastName><ForeName>Elizabeth E</ForeName><Initials>EE</Initials><AffiliationInfo><Affiliation>United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, California, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Backus</LastName><ForeName>Elaine A</ForeName><Initials>EA</Initials><AffiliationInfo><Affiliation>United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, California, United States of America.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><DataBankList 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sort="Rogers, Elizabeth E" uniqKey="Rogers E" first="Elizabeth E" last="Rogers">Elizabeth E. 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HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:25184624" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a GrapevineDiseaseV1
| This area was generated with Dilib version V0.6.37. |  |